Motif View

Internal ID 17656647
Source Database TransTermHP TERM 99
Feature Type terminator
Name
Rho-independent transcription terminator TERM 99
Sequence GCCCGCCATCCGGCGGGC
Look for more occurrences
Start 458120
End 458137
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa UCBPP-PA14 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CGCGAAGATGAGAAA(5' tail) GCCCGCC(5' stem) GGAT(loop) GGCGGGC(3' stem) TTTTTCGTGGTGGCA(3' tail). Confidence: 90. opp_overlap 458120

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685