Motif View

Internal ID 17656673
Source Database TransTermHP TERM 137
Feature Type terminator
Name
Rho-independent transcription terminator TERM 137
Sequence CGCCGGGCCGCACGGCCCGGCG
Look for more occurrences
Start 630080
End 630101
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa UCBPP-PA14 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CAGGGAGAGGGAGAA(5' tail) CGCCGGGCC(5' stem) GTGC(loop) GGCCCGGCG(3' stem) GGAAGGAATCAGGCG(3' tail). Confidence: 95. opp_overlap 630089 630100

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685