Motif View

Internal ID 17656694
Source Database TransTermHP TERM 165
Feature Type terminator
Name
Rho-independent transcription terminator TERM 165
Sequence CCAAAACCCCTGGTCAGCGATGACCGGGGGTTTTGC
Look for more occurrences
Start 738251
End 738286
Strand +
Genomic Context Located within gene [PA14_08610]
Replicon Pseudomonas aeruginosa UCBPP-PA14 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CGTCAAGCTCCTATC(5' tail) CCAAAACCCCTGGTCA(5' stem) GCGA(loop) TGACCGGGGGTTTTGC(3' stem) TTTTGCGCGCGGAAA(3' tail). Confidence: 100. opp_overlap 738257, overlap 738252 738257

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685