Internal ID | 17656694 | Source Database | TransTermHP TERM 165 |
Feature Type | terminator |
Name |
Rho-independent transcription terminator TERM 165
|
Sequence |
CCAAAACCCCTGGTCAGCGATGACCGGGGGTTTTGC Look for more occurrences |
Start | 738251 |
End | 738286 |
Strand | + |
Genomic Context | Located within gene [PA14_08610] |
Replicon | Pseudomonas aeruginosa UCBPP-PA14 chromosome, complete genome. |
Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
Additional Comments | CGTCAAGCTCCTATC(5' tail) CCAAAACCCCTGGTCA(5' stem) GCGA(loop) TGACCGGGGGTTTTGC(3' stem) TTTTGCGCGCGGAAA(3' tail). Confidence: 100. opp_overlap 738257, overlap 738252 738257 |
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|