Motif View

Internal ID 17656745
Source Database TransTermHP TERM 266
Feature Type terminator
Name
Rho-independent transcription terminator TERM 266
Sequence TGCACAAGGGCGCCCGCGGGCGCCCTTGTGCA
Look for more occurrences
Start 1251089
End 1251120
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa UCBPP-PA14 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments TGACTGTCGCAATGA(5' tail) TGCACAAGGGCGCC(5' stem) CGCG(loop) GGCGCCCTTGTGCA(3' stem) TTTTTATGGAGATGA(3' tail). Confidence: 100. opp_overlap 1251089, overlap 1251096

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685