Motif View

Internal ID 17657172
Source Database TransTermHP TERM 941
Feature Type terminator
Name
Rho-independent transcription terminator TERM 941
Sequence GCCGGAAGCGTGAGCGCTTCCGGC
Look for more occurrences
Start 4024492
End 4024515
Strand +
Genomic Context
Replicon Pseudomonas aeruginosa UCBPP-PA14 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CCGCTTGACGAAAAA(5' tail) GCCGGAAGCG(5' stem) TGAG(loop) CGCTTCCGGC(3' stem) TTTTTCATTCGGCTT(3' tail). Confidence: 100. opp_overlap 4024492

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685