Motif View

Internal ID 17657186
Source Database TransTermHP TERM 967
Feature Type terminator
Name
Rho-independent transcription terminator TERM 967
Sequence TTAAGTGCAGCTTAA
Look for more occurrences
Start 4279103
End 4279117
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa UCBPP-PA14 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GTTTCATGAAAAAAA(5' tail) TTAAGC(5' stem) TGC(loop) ACTTAA(3' stem) AGCATATGCACGAAC(3' tail). Confidence: 91.

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685