Motif View

Internal ID 17657190
Source Database TransTermHP TERM 973
Feature Type terminator
Name
Rho-independent transcription terminator TERM 973
Sequence GGACACAAGGCACTCCGACCATCGGGTGCCTTGTGTCG
Look for more occurrences
Start 4334977
End 4335014
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa UCBPP-PA14 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CACCTGGACGGAAAA(5' tail) CGACACAAGGCAC-CCGA(5' stem) TGG(loop) TCGGAGTGCCTTGTGTCC(3' stem) GGGACAGCGGCGAAG(3' tail). Confidence: 100. gap 1, opp_overlap 4334985, overlap 4334978 4334980

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685