Motif View

Internal ID 17657212
Source Database TransTermHP TERM 1007
Feature Type terminator
Name
Rho-independent transcription terminator TERM 1007
Sequence CGGCCCGTGAGGGCCG
Look for more occurrences
Start 4492010
End 4492025
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa UCBPP-PA14 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CAGCGCCTACGAAAA(5' tail) CGGCCC(5' stem) TCAC(loop) GGGCCG(3' stem) TTTTTTTATGCCGAG(3' tail). Confidence: 91. opp_overlap 4492010

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685