Motif View

Internal ID 17657237
Source Database TransTermHP TERM 1050
Feature Type terminator
Name
Rho-independent transcription terminator TERM 1050
Sequence TTTGGCGTTGGTCAGGCATCGGCTGTCCAACGCCAGG
Look for more occurrences
Start 4631009
End 4631045
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa UCBPP-PA14 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CGTCCGAAGAGAAAA(5' tail) CCTGGCGTTGGACAGCC(5' stem) GAT(loop) GCCTGACCAACGCCAAA(3' stem) GAAAGGTCCGACAGG(3' tail). Confidence: 100. overlap 4631010 4631011

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685