Motif View

Internal ID 17657250
Source Database TransTermHP TERM 1068
Feature Type terminator
Name
Rho-independent transcription terminator TERM 1068
Sequence GACCCCGCGCGGTGCGAGCCGCGCGGGGTC
Look for more occurrences
Start 4679917
End 4679946
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa UCBPP-PA14 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CCGCGCCAAATGAAA(5' tail) GACCCCGCGCGGC(5' stem) TCGC(loop) ACCGCGCGGGGTC(3' stem) GTTTCGGATCAGGCG(3' tail). Confidence: 100. opp_overlap 4679916 4679917 4679919

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685