Motif View

Internal ID 17657270
Source Database TransTermHP TERM 1098
Feature Type terminator
Name
Rho-independent transcription terminator TERM 1098
Sequence GCCCGGCCGCGTGCCGGGC
Look for more occurrences
Start 4772737
End 4772755
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa UCBPP-PA14 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments ACCGGGCATAAAAAA(5' tail) GCCCGGC(5' stem) ACGCG(loop) GCCGGGC(3' stem) AAAAGGGATACACCA(3' tail). Confidence: 100. overlap 4772723 4772721

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685