Motif View

Internal ID 17657276
Source Database TransTermHP TERM 1108
Feature Type terminator
Name
Rho-independent transcription terminator TERM 1108
Sequence GGGCCTCGGACGAGGCCC
Look for more occurrences
Start 4791834
End 4791851
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa UCBPP-PA14 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GGCGCAACGAAAAAA(5' tail) GGGCCTC(5' stem) GTCC(loop) GAGGCCC(3' stem) CTTTTCTTTTCCGGC(3' tail). Confidence: 100. opp_overlap 4791833 4791828 4791834

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685