Motif View

Internal ID 17657507
Source Database TransTermHP TERM 1445
Feature Type terminator
Name
Rho-independent transcription terminator TERM 1445
Sequence CGGGATTTTCCGG
Look for more occurrences
Start 6044311
End 6044323
Strand +
Genomic Context
Replicon Pseudomonas aeruginosa UCBPP-PA14 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CCACTCCGCCGTGGG(5' tail) CGGGA(5' stem) TTT(loop) TCCGG(3' stem) TTTTTTTCCCGACTC(3' tail). Confidence: 91. overlap 6044291 6044290 6044311

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685