Motif View

Internal ID 17657550
Source Database TransTermHP TERM 1505
Feature Type terminator
Name
Rho-independent transcription terminator TERM 1505
Sequence GCCCGGCCGGAGAGCCGGGC
Look for more occurrences
Start 6245069
End 6245088
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa UCBPP-PA14 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments ATCAGGCGAAAAAAA(5' tail) GCCCGGC(5' stem) TCTCCG(loop) GCCGGGC(3' stem) CAGACAAAACTCAGG(3' tail). Confidence: 100.

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685