Motif View

Internal ID 17660374
Source Database TransTermHP TERM 106
Feature Type terminator
Name
Rho-independent transcription terminator TERM 106
Sequence GGACGCGGTGTATGCCGCGTCC
Look for more occurrences
Start 508836
End 508857
Strand +
Genomic Context
Replicon Pseudomonas syringae pv. phaseolicola 1448A chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments TAGCTGAGCGAAAGA(5' tail) GGACGCGGT(5' stem) GTAT(loop) GCCGCGTCC(3' stem) TTTTTTTATGCGCGC(3' tail). Confidence: 100. opp_overlap 508834 508836

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685