Motif View

Internal ID 17660916
Source Database TransTermHP TERM 957
Feature Type terminator
Name
Rho-independent transcription terminator TERM 957
Sequence GCCCGCAACCAGTAATGGTTGCGGGC
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Start 4238312
End 4238337
Strand +
Genomic Context
Replicon Pseudomonas syringae pv. phaseolicola 1448A chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GCCAGACTGAAAAAA(5' tail) GCCCGCAACCA(5' stem) GTAA(loop) TGGTTGCGGGC(3' stem) TTTTTATTGCGTGCC(3' tail). Confidence: 100. opp_overlap 4238312

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685