| Internal ID | 17661600 | Source Database | TransTermHP TERM 551 |
| Feature Type | terminator |
| Name |
Rho-independent transcription terminator TERM 551
|
| Sequence |
CAAGCAATCCCTCGCTTCGTGTGCTGCACGGAGCGAGGGATTCTTG Look for more occurrences |
| Start | 2097489 |
| End | 2097534 |
| Strand | + |
| Genomic Context | |
| Replicon | Pseudomonas protegens Pf-5 chromosome, complete genome. |
| Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
| Additional Comments | GCAAGCCTTGCGTTT(5' tail) CAAGCAATCCCTCGCTTCGTGT(5' stem) GCT(loop) GCACGGAGCGAGGGATT-CTTG(3' stem) TTTCTGCGGCCCCTT(3' tail). Confidence: 100. gap 1, opp_overlap 2097496, overlap 2097496 |
|
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|