Motif View

Internal ID 17662340
Source Database TransTermHP TERM 10
Feature Type terminator
Name
Rho-independent transcription terminator TERM 10
Sequence GGCGTCGGAAGACGCC
Look for more occurrences
Start 13518
End 13533
Strand +
Genomic Context
Replicon Pseudomonas aeruginosa PA7 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GTGGTACTGAAAAAA(5' tail) GGCGTC(5' stem) GGAA(loop) GACGCC(3' stem) TTTTTCATATCCGGG(3' tail). Confidence: 100. opp_overlap 13518

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685