Motif View

Internal ID 17662341
Source Database TransTermHP TERM 13
Feature Type terminator
Name
Rho-independent transcription terminator TERM 13
Sequence GGCGCAGCGGAGGTAGCCGCTGCGCC
Look for more occurrences
Start 14678
End 14703
Strand +
Genomic Context
Replicon Pseudomonas aeruginosa PA7 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CCAGACTGATGAAGA(5' tail) GGCGCAGCGG(5' stem) AGGTAG(loop) CCGCTGCGCC(3' stem) TTTTTTCGTTCAGGG(3' tail). Confidence: 100. opp_overlap 14676 14678

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685