Motif View

Internal ID 17662355
Source Database TransTermHP TERM 46
Feature Type terminator
Name
Rho-independent transcription terminator TERM 46
Sequence CGCCGCATACGATATGCGGCG
Look for more occurrences
Start 254121
End 254141
Strand +
Genomic Context Located within gene [PSPA7_0239]
Replicon Pseudomonas aeruginosa PA7 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GGTACCCTGTCCTTG(5' tail) CGCCGCATA(5' stem) CGA(loop) TATGCGGCG(3' stem) TTTTTTTTGCCTTTC(3' tail). Confidence: 100.

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685