Motif View

Internal ID 17666478
Source Database TransTermHP TERM 1210
Feature Type terminator
Name
Rho-independent transcription terminator TERM 1210
Sequence GATCGTTCCCACGCGGCGTGGGAACGATC
Look for more occurrences
Start 4000765
End 4000793
Strand -
Genomic Context
Replicon Pseudomonas fluorescens Pf0-1 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments TCACAGTCTTGAAGA(5' tail) GATCGTTCCCACG(5' stem) CCG(loop) CGTGGGAACGATC(3' stem) AGCGATCAACTTAAG(3' tail). Confidence: 100. overlap 4000767

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685