Motif View

Internal ID 17666479
Source Database TransTermHP TERM 1211
Feature Type terminator
Name
Rho-independent transcription terminator TERM 1211
Sequence TCGTTCCCACGCGGCGTGGGAACGA
Look for more occurrences
Start 4000767
End 4000791
Strand -
Genomic Context
Replicon Pseudomonas fluorescens Pf0-1 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments ACAGTCTTGAAGAGA(5' tail) TCGTTCCCACG(5' stem) CCG(loop) CGTGGGAACGA(3' stem) TCAGCGATCAACTTA(3' tail). Confidence: 100. overlap 4000765

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685