Internal ID | 17667949 | Source Database | TransTermHP TERM 38 |
Feature Type | terminator |
Name |
Rho-independent transcription terminator TERM 38
|
Sequence |
CTGCCCCCTGTAGGCGCGGGCTTGCCCGCGCCTACAGGGTCTCTG Look for more occurrences |
Start | 125348 |
End | 125392 |
Strand | - |
Genomic Context | |
Replicon | Pseudomonas putida GB-1 chromosome, complete genome. |
Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
Additional Comments | TGCTTTGAAGGGAAA(5' tail) CAGAGACCCTGTAGGCGCGGG(5' stem) CAAG(loop) CCCGCGCCTACAGGGGG-CAG(3' stem) ATGAAAACTTCAGAA(3' tail). Confidence: 100. gap 1, overlap 125350 125352 125354 |
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
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