Internal ID | 17667950 | Source Database | TransTermHP TERM 39 |
Feature Type | terminator |
Name |
Rho-independent transcription terminator TERM 39
|
Sequence |
GCCCCCTGTAGGCGCGGGCTTGCCCGCGCCTACAGGGTCTC Look for more occurrences |
Start | 125350 |
End | 125390 |
Strand | - |
Genomic Context | |
Replicon | Pseudomonas putida GB-1 chromosome, complete genome. |
Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
Additional Comments | CTTTGAAGGGAAACA(5' tail) GAGACCCTGTAGGCGCGGG(5' stem) CAAG(loop) CCCGCGCCTACAGGGGG-C(3' stem) AGATGAAAACTTCAG(3' tail). Confidence: 95. gap 1, overlap 125348 125352 125354 |
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
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