| Internal ID | 17668757 | Source Database | TransTermHP TERM 1385 |
| Feature Type | terminator |
| Name |
Rho-independent transcription terminator TERM 1385
|
| Sequence |
CTGCTTACCCCTAGCGGCAAGCCTTTGCTTGCCGCTGGGGGTAGCGCTC Look for more occurrences |
| Start | 5760674 |
| End | 5760722 |
| Strand | + |
| Genomic Context | |
| Replicon | Pseudomonas putida GB-1 chromosome, complete genome. |
| Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
| Additional Comments | GCGCATGATCTGACC(5' tail) CTGC-TTACCCCTAGCGGCAAGC(5' stem) CTTT(loop) GCTTGCCGCTGGGGGTAGCGCTC(3' stem) TTTAGACTTACGCCT(3' tail). Confidence: 95. gap 1, overlap 5760675 5760676 |
|
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|