| Internal ID | 17668798 | Source Database | TransTermHP TERM 1437 |
| Feature Type | terminator |
| Name |
Rho-independent transcription terminator TERM 1437
|
| Sequence |
GTAAGCATTGGCCTCTTCGCGGGTGAACCCGCGAAGAGGCCAGTACCGGC Look for more occurrences |
| Start | 5928812 |
| End | 5928861 |
| Strand | - |
| Genomic Context | Located within gene [PputGB1_5309] |
| Replicon | Pseudomonas putida GB-1 chromosome, complete genome. |
| Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
| Additional Comments | TGGTTACACAAGTAA(5' tail) GCCGGTACTGGCCTCTTCGCGGG(5' stem) TTCA(loop) CCCGCGAAGAGGCCAATGCTTAC(3' stem) AGCACAACTCTCAAG(3' tail). Confidence: 100. opp_overlap 5928819, overlap 5928808 5928849 |
|
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|