Motif View

Internal ID 17670468
Source Database TransTermHP TERM 871
Feature Type terminator
Name
Rho-independent transcription terminator TERM 871
Sequence GTGGCACACGCCGACGCTCGGCGTGTGCCAC
Look for more occurrences
Start 2847473
End 2847503
Strand -
Genomic Context
Replicon Pseudomonas fulva 12-X chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments AAATGCAACGCAAAA(5' tail) GTGGCACACGCCGA(5' stem) GCG(loop) TCGGCGTGTGCCAC(3' stem) CTGCAACAAGAAATC(3' tail). Confidence: 100.

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685