| Internal ID | 17671818 | Source Database | TransTermHP TERM 1405 |
| Feature Type | terminator |
| Name |
Rho-independent transcription terminator TERM 1405
|
| Sequence |
ACAAGAACCCCGGCTAGAGCCGGGGTTCTTGC Look for more occurrences |
| Start | 5216905 |
| End | 5216936 |
| Strand | + |
| Genomic Context | |
| Replicon | Pseudomonas mendocina NK-01 chromosome, complete genome. |
| Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
| Additional Comments | AGGCTCAGCGCAAAA(5' tail) ACAAGAACCCCGGC(5' stem) TAGA(loop) GCCGGGGTTCTTGC(3' stem) TTTCTAGACCTTCAG(3' tail). Confidence: 100. opp_overlap 5216906, overlap 5216906 5216912 |
|
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|