Motif View

Internal ID 17673870
Source Database TransTermHP TERM 10
Feature Type terminator
Name
Rho-independent transcription terminator TERM 10
Sequence GGCGCCTTGGCGGGCGCC
Look for more occurrences
Start 51551
End 51568
Strand +
Genomic Context
Replicon Pseudomonas putida S16 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GGTATTTAGGGAGGG(5' tail) GGCGCCT(5' stem) TGGC(loop) GGGCGCC(3' stem) TTTTCTGATTTCATC(3' tail). Confidence: 93.

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685