| Internal ID | 17673874 | Source Database | TransTermHP TERM 15 |
| Feature Type | terminator |
| Name |
Rho-independent transcription terminator TERM 15
|
| Sequence |
CCCGCTCCCACAGGTACAGCGTAGGCCGTGAGCCTTTCGCTATCCCTGTGGGAGCGGG Look for more occurrences |
| Start | 75550 |
| End | 75607 |
| Strand | + |
| Genomic Context | |
| Replicon | Pseudomonas putida S16 chromosome, complete genome. |
| Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
| Additional Comments | AGCTTCGCGGGTAAA(5' tail) CCCGCTCCCACAGGTACAGCG-TAGGC(5' stem) CGTGA(loop) GCCTTTCGCTATCCCTGTGGGAGCGGG(3' stem) TTTACCCGCGAAGAG(3' tail). Confidence: 100. gap 1, opp_overlap 75550 |
|
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|