Motif View

Internal ID 17674572
Source Database TransTermHP TERM 1200
Feature Type terminator
Name
Rho-independent transcription terminator TERM 1200
Sequence ACCCCTGCAGGAGCGGGCATGCCCGCTCCTGCAGGGGG
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Start 4526865
End 4526902
Strand -
Genomic Context
Replicon Pseudomonas putida S16 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments AACTTGCAGAAACCA(5' tail) CCCCCTGCAGGAGCGGG(5' stem) CATG(loop) CCCGCTCCTGCAGGGGT(3' stem) TCAGGTATCAATAAT(3' tail). Confidence: 100. overlap 4526862

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685