Internal ID | 17675565 | Source Database | TransTermHP TERM 1143 |
Feature Type | terminator |
Name |
Rho-independent transcription terminator TERM 1143
|
Sequence |
ACCGCTCCTACAGGGATCGCCACGGTTCCAGGCCTGTGGGGTACCTGTAGGAGCGGG Look for more occurrences |
Start | 5530407 |
End | 5530463 |
Strand | - |
Genomic Context | |
Replicon | Pseudomonas putida BIRD-1 chromosome, complete genome. |
Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
Additional Comments | CCCTTCGCGGGTAAA(5' tail) CCCGCTCCTACAGGTACC-CCACAGGCC(5' stem) TGG(loop) AACC-GTGGCGATCCCTGTAGGAGCGGT(3' stem) TACCGCGAATAGGCC(3' tail). Confidence: 90. overlap 5530408 |
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|