| Internal ID | 17675566 | Source Database | TransTermHP TERM 1144 |
| Feature Type | terminator |
| Name |
Rho-independent transcription terminator TERM 1144
|
| Sequence |
CCGCTCCTACAGGGATCGCCACGGTTCCAGGCCTGTGGGGTACCTGTAGGAGCGG Look for more occurrences |
| Start | 5530408 |
| End | 5530462 |
| Strand | - |
| Genomic Context | |
| Replicon | Pseudomonas putida BIRD-1 chromosome, complete genome. |
| Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
| Additional Comments | CCTTCGCGGGTAAAC(5' tail) CCGCTCCTACAGGTACC-CCACAGGCC(5' stem) TGG(loop) AACC-GTGGCGATCCCTGTAGGAGCGG(3' stem) TTACCGCGAATAGGC(3' tail). Confidence: 95. overlap 5530407 |
|
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|