Motif View

Internal ID 17676639
Source Database TransTermHP TERM 92
Feature Type terminator
Name
Rho-independent transcription terminator TERM 92
Sequence CCTCGGCCTGGGCGCAGGCCGAGG
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Start 432961
End 432984
Strand +
Genomic Context Located within gene [PADK2_02000]
Replicon Pseudomonas aeruginosa DK2 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments AGTAGGCCAGCGGCT(5' tail) CCTCGGCCTG(5' stem) GGCG(loop) CAGGCCGAGG(3' stem) TTTCCAGTTGCAGGG(3' tail). Confidence: 100.

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685