Motif View

Internal ID 17676643
Source Database TransTermHP TERM 97
Feature Type terminator
Name
Rho-independent transcription terminator TERM 97
Sequence GCCGGCGCCAGGCGCCGCCGCAGCAGGCGTTGGCGCAGGC
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Start 458578
End 458617
Strand +
Genomic Context Located within gene [PADK2_02105]
Replicon Pseudomonas aeruginosa DK2 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GTAGACGCGCCTCAG(5' tail) GCCGGCGCCAGGCGCC-GC(5' stem) CGCA(loop) GCAGGCG-TTGGCGCAGGC(3' stem) TTTCGAACCTGCCGA(3' tail). Confidence: 90.

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685