| Internal ID | 17681471 | Source Database | TransTermHP TERM 1050 |
| Feature Type | terminator |
| Name |
Rho-independent transcription terminator TERM 1050
|
| Sequence |
TTTGAGATGAGGGGGCCGGCGGTCTAGTCGCCGGCCTCTTCATGTTGGA Look for more occurrences |
| Start | 4181591 |
| End | 4181639 |
| Strand | - |
| Genomic Context | Located within gene alaS |
| Replicon | Pseudomonas putida HB3267, complete genome. |
| Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
| Additional Comments | GGCCCCAAAAAACAA(5' tail) TCCAACATGAAGAGGCCGGCGAC(5' stem) TAG(loop) ACCGCCGGCCCCCTCATCTCAAA(3' stem) GTCCCTGCTCTGCGA(3' tail). Confidence: 95. opp_overlap 4181601, overlap 4181588 4181596 4181598 |
|
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|