Motif View

Internal ID 17682798
Source Database TransTermHP TERM 17
Feature Type terminator
Name
Rho-independent transcription terminator TERM 17
Sequence CGGACACTCCCAAGGGGTGTCCG
Look for more occurrences
Start 57874
End 57896
Strand +
Genomic Context
Replicon Pseudomonas aeruginosa B136-33, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GGTCGACGGCAGAGA(5' tail) CGGACACTCC(5' stem) CAA(loop) GGGGTGTCCG(3' stem) TTTTCGTTTGCGCCG(3' tail). Confidence: 100. opp_overlap 57874

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685