Motif View

Internal ID 17682829
Source Database TransTermHP TERM 76
Feature Type terminator
Name
Rho-independent transcription terminator TERM 76
Sequence GCGCGGCGCCACCTCCGGGTGGCGTCGCGG
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Start 385629
End 385658
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa B136-33, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments ACCCTTCGGCGAAAA(5' tail) CCGCGACGCCACC(5' stem) CGGA(loop) GGTGGCGCCGCGC(3' stem) CTATCAGTGTCCGGC(3' tail). Confidence: 100. opp_overlap 385652, overlap 385615 385630

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685