Motif View

Internal ID 17683713
Source Database TransTermHP TERM 1470
Feature Type terminator
Name
Rho-independent transcription terminator TERM 1470
Sequence GTGAGCAAGTTCTTGCATAGCACTGTGCAACAACTTGCTCAC
Look for more occurrences
Start 6090210
End 6090251
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa B136-33, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GTTTATCCCGAAAAA(5' tail) GTGAGCAAGTTGTTGCACA(5' stem) GTGC(loop) TATGCAAGAACTTGCTCAC(3' stem) TTCATCGAAGACCCC(3' tail). Confidence: 100. opp_overlap 6090210 6090218

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685