Motif View

Internal ID 17683889
Source Database TransTermHP TERM 191
Feature Type terminator
Name
Rho-independent transcription terminator TERM 191
Sequence AGGGCCTCGTCCGAGGCCCC
Look for more occurrences
Start 831080
End 831099
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa RP73, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CGCCGGAAAAGAAAA(5' tail) GGGGCCTC(5' stem) GGAC(loop) GAGGCCCT(3' stem) TTTTTCGTTGCGCCG(3' tail). Confidence: 100. opp_overlap 831081, overlap 831075 831081

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685