Motif View

Internal ID 17684091
Source Database TransTermHP TERM 499
Feature Type terminator
Name
Rho-independent transcription terminator TERM 499
Sequence GCCCCGCGATGCGGGGC
Look for more occurrences
Start 2179372
End 2179388
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa RP73, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CCCGAATACGAAGAA(5' tail) GCCCCGC(5' stem) ATC(loop) GCGGGGC(3' stem) TTTCTCTTGGCCGTT(3' tail). Confidence: 90. opp_overlap 2179372

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685