Motif View

Internal ID 17685370
Source Database TransTermHP TERM 932
Feature Type terminator
Name
Rho-independent transcription terminator TERM 932
Sequence CCCCGCTCCGGCGGGG
Look for more occurrences
Start 4298143
End 4298158
Strand +
Genomic Context
Replicon Pseudomonas stutzeri RCH2 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GCCGAAGCAAACAAA(5' tail) CCCCGC(5' stem) TCCG(loop) GCGGGG(3' stem) TTTTCTCTTCCAGGG(3' tail). Confidence: 100. opp_overlap 4298143

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685