Internal ID | 17685415 | Source Database | TransTermHP TERM 5 |
Feature Type | terminator |
Name |
Rho-independent transcription terminator TERM 5
|
Sequence |
CCGGCTATATCAGCCGG Look for more occurrences |
Start | 6818 |
End | 6834 |
Strand | + |
Genomic Context | |
Replicon | Pseudomonas sp. UW4 chromosome, complete genome. |
Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
Additional Comments | ACAGGCATAAAAAAA(5' tail) CCGGCT(5' stem) ATATC(loop) AGCCGG(3' stem) TTTTTTTACGTCCGA(3' tail). Confidence: 100. opp_overlap 6818 6806 6804 |
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|