Motif View

Internal ID 17685876
Source Database TransTermHP TERM 632
Feature Type terminator
Name
Rho-independent transcription terminator TERM 632
Sequence CGCCCGGGCGAGATTCGCTCGGGCG
Look for more occurrences
Start 2822342
End 2822366
Strand +
Genomic Context
Replicon Pseudomonas sp. UW4 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments ACCGCCCAATAAAAA(5' tail) CGCCCGGGCGA(5' stem) GAT(loop) TCGCTCGGGCG(3' stem) TTTTTTTATGTCTTC(3' tail). Confidence: 100. opp_overlap 2822342

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685