Internal ID | 17688840 | Source Database | TransTermHP TERM 533 |
Feature Type | terminator |
Name |
Rho-independent transcription terminator TERM 533
|
Sequence |
GAAAAAGCGCGCCGATTGGCGCGCTTTTTC Look for more occurrences |
Start | 1706399 |
End | 1706428 |
Strand | + |
Genomic Context | |
Replicon | Pseudomonas denitrificans ATCC 13867, complete genome. |
Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
Additional Comments | GAGTTTTCGCTGCAT(5' tail) GAAAAAGCGCGCC(5' stem) GATT(loop) GGCGCGCTTTTTC(3' stem) TTTGGGGTGTATTGG(3' tail). Confidence: 100. opp_overlap 1706405, overlap 1706405 |
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|