Motif View

Internal ID 17689020
Source Database TransTermHP TERM 807
Feature Type terminator
Name
Rho-independent transcription terminator TERM 807
Sequence CCGCGCCCCCATTGGGAGCGCGG
Look for more occurrences
Start 2544082
End 2544104
Strand -
Genomic Context
Replicon Pseudomonas denitrificans ATCC 13867, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CAAGCAAGAGAAAAA(5' tail) CCGCGCTCCC(5' stem) AAT(loop) GGGGGCGCGG(3' stem) TTTTTTGGTCTATGA(3' tail). Confidence: 100. opp_overlap 2544082

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685