Motif View

Internal ID 17689035
Source Database TransTermHP TERM 832
Feature Type terminator
Name
Rho-independent transcription terminator TERM 832
Sequence GGCGCCTGCGGGCGCC
Look for more occurrences
Start 2603030
End 2603045
Strand +
Genomic Context
Replicon Pseudomonas denitrificans ATCC 13867, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GGGCTGATGGAAGAG(5' tail) GGCGCC(5' stem) TGCG(loop) GGCGCC(3' stem) TTTTTTCTGTCGTAG(3' tail). Confidence: 100. opp_overlap 2603029, overlap 2603023

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685