Pseudomonas fulva 12-X

Strain Overview
Organism Name Pseudomonas fulva 12-X
Species Pseudomonas fulva
Strain 12-X
Description/Title Pseudomonas fulva 12-X, complete genome.
Annotated Genes 4575
Partial Genes
Host Information
Geographic Location
Location Name Japan
Isolation Source rice paddy
Sample Provider
Name
E-mail
Institution
Date Collected Missing

MLST Data

Database Scheme Sequence Type Alleles
Strains have MLST sequence types assigned when available. They are currently based on schemes at the PubMLST website (https://pubmlst.org/) developed by Keith Jolley (Jolley & Maiden 2010, BMC Bioinformatics, 11:595) that were predicted by the "mlst" software developed by Torsten Seemann (Github https://github.com/tseemann/mlst).
Assembly
Assembly DB
RefSeq
Assembly Accession
GCF_000213805.1
Assembly Status latest
Scaffolds
Contigs
Contig N50
Assembly Level Complete Genome
Percent GC
Cross-References
NCBI BioSample Accession SAMN00713619
NCBI Taxonomy ID 743720
NCBI Bioprojects
Related Data
Additional Genome Project Info
Sequencing Information
Genome Assembly Information
Details
Genome Browsers*
Pseudomonas fulva 12-X chromosome, complete genome.

Annotated Features

Feature Count
gene 4540
CDS 4461
tRNA 63
pseudo 35
rRNA 12
ncRNA 3
tmRNA 1

Subcellular Localization

Localization Count
Cytoplasmic 2007
Cytoplasmic Membrane 1093
Periplasmic 155
Outer Membrane 92
Extracellular 42
Unknown 935
Unknown (This protein may have multiple localization sites) 137
Flagellar 32
Fimbrial 4

Replicons

Name Length GC
Pseudomonas fulva 12-X chromosome, complete genome. 4920769 bp 63.5%
Replicon details

Download Sequences

Genomic ORF DNA Intergenic Amino Acid

Download Gene Annotations

TSV CSV GBK EMBL GFF3 GFF3 + sequence GTF Orthologs