Pseudomonas putida BIRD-1

Strain Overview
Organism Name Pseudomonas putida BIRD-1
Species Pseudomonas putida
Strain BIRD-1
Description/Title Sample from Pseudomonas putida BIRD-1
Scaffolds
Contigs
Contig N50
Assembly Level Complete Genome
Percent GC
Annotated Genes 5046
Partial Genes
Cross-References
NCBI BioSample Accession SAMN02603225
NCBI Taxonomy ID 931281
NCBI Bioprojects
Assembly DB
RefSeq
Assembly Accession
Related Data
Additional Genome Project Info
Sequencing Information
Genome Assembly Information
Genome Browsers*
Pseudomonas putida BIRD-1 chromosome, complete genome.

Annotated Features

Feature Count
gene 5046
CDS 4960
tRNA 64
rRNA 22

Subcellular Localization

Localization Count
Cytoplasmic 2268
Cytoplasmic Membrane 1180
Periplasmic 157
Outer Membrane 138
Extracellular 31
Unknown 1057
Unknown (This protein may have multiple localization sites) 129
Flagellar 16
Fimbrial 2
Sample Provider
Name
E-mail
Institution
Date Collected
Geographic Location
Isolation Source soil
Host Information

Replicons

Name Length GC
Pseudomonas putida BIRD-1 chromosome, complete genome. 5731541 bp 61.7%
Replicon details

Download Sequences

Genomic ORF DNA Intergenic Amino Acid

Download Gene Annotations

TAB CSV GBK EMBL GFF3 GFF3 + sequence GTF Orthologs

Download Intergenic Region Annotations

File also contains gene annotations

GTF