Strain Overview | |
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Organism Name | Pseudomonas aeruginosa #700 |
Species | Pseudomonas aeruginosa |
Strain | #700 |
Description/Title | |
Annotated Genes | 6779 |
Partial Genes | 64 |
Host Information | |
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Host Species Disease | non-cystic fibrosis |
Geographic Location | |
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Location Name | China |
Isolation Source | sputum |
Latitude/Longitude | 30.28 N 120.15 E |
Sample Provider | |
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Name | Yanyan Hu |
yanyanhu@zju.edu.cn | |
Institution | Second Affiliated Hospital of Zhejiang University |
Date Collected | 2021 |
Database | Scheme | Sequence Type | Alleles | |||||||
---|---|---|---|---|---|---|---|---|---|---|
PubMLST | paeruginosa | 235 |
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Strains have MLST sequence types assigned when available. They are currently based on schemes at the PubMLST website (https://pubmlst.org/) developed by Keith Jolley (Jolley & Maiden 2010, BMC Bioinformatics, 11:595) that were predicted by the "mlst" software developed by Torsten Seemann (Github https://github.com/tseemann/mlst). |
Assembly | |
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Assembly DB |
RefSeq
|
Assembly Accession | Assembly Status | latest |
Scaffolds | 6 |
Contigs | |
Contig N50 | 6918355 |
Assembly Level | Contig |
Percent GC |
Cross-References | |
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NCBI BioSample Accession | SAMN36630189 |
NCBI Taxonomy ID | 287 |
NCBI Bioprojects |
Related Data | |
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Additional Genome Project Info | |
Sequencing Information | |
Genome Assembly Information |
Genomic | ORF DNA | Intergenic | Amino Acid |
TSV | CSV | GBK | EMBL | GFF3 | GFF3 + sequence | GTF |